Wednesday 27 January 2010

The proof of the cover of Journal of Physical Chemistry A - My image made the cover



So this is what the cover of the journal will look like with my cover image... hoorah!!

The work in the paper is based upon my PhD project, a literature review.

Here is the abstract:

Potential Energy Surfaces Fitted by Artificial Neural Networks


Chris M. Handley, and Paul L.A. Popelier*

Molecular Mechanics is the tool of choice for the modelling of systems that are so large or complex that it is impractical or impossible to model them by ab initio methods. For this reason there is a need for accurate potentials that are able to quickly reproduce ab initio quality results at the fraction of the cost. The interactions within force fields are represented by a number of functions. Some interactions are well understood and can be represented by simple mathematical functions while others are not so well understood and their functional form is represented in a simplistic manner or not even known. In the last 20 years there have been the first examples of a new design ethic, where novel and contemporary methods using machine learning, in particular artificial neural networks, have been used to find the nature of the underlying functions of a force field. Here we appraise what has been achieved over this time and what requires further improvements, while offering some insight and guidance for the development of future force fields.

Monday 25 January 2010

Friends Only


For some reason the last warning disappeared?


Ok. Most entries will from now on be friends only.



Please comment here to be added.

Hope you make the cut.

Tuesday 19 January 2010

The last week

So as you will know my birthday has been and gone. But the last week has been a strange one.

Almost 2 weeks ago my grandfather on my Dad's side passed away. He and my grandmother had moved out of the family home at Logaston in Herefordshire to a care home. My grandmother is suffering from dementia and my grandfather is just too old to look after her himself. The family home was left by my great grandfather to my father so that it would stay in the family. This means that my grandmother is only the trustee of the property. This has led to loads of shit with the brothers (2 younger) and sisters (one older and two younger) of my father. They wanted to chop the place up, sell it, get the money! When they realized they couldn't do this they wanted to rent it out, and thus get a slice of the profit. Thing is any money made in selling or renting the property goes to my father (as it is the profit of his property), my grandmother would only be entitled to the interest.

So when it came to my grandparents moving out, the aunts and uncles stripped the house of anything of worth, even ripping out original fixtures that are part of the house. If they had just been adult about the issue my Dad may have given them more options. But no they took the hard route.

Since then of course my grandfather has died. He seemed healthy enough, but  also it seems that he had little to live for any more. He was 82, a grand old age really. The sisters didn't want to tell my grandmother. The doctors did. But my grandmother did know. She may have dementia but she still has her moments of intuition when everyone seems to be coming and going more frequently.

So the funeral. Sam and I got a lift down with my sister Zoe, and Rob her partner, to Logaston where my parents now live. We had been down there only a few weeks back at new year. It is still quite surreal to stay there (and very cold but now not as bad as during New Year), but also quite nice. Warm roaring log fire, and a level a simplicity to livining there.

I had been asked to be a coffin bearer, along with six other male cousins, and another who would carry the poppy wreath. We were to dress in black, red ties, and poppies. My aunt had the nerve to call my Dad twice to confirm that I would be carrying the coffin. I think she didn't want the 'freak' being seen.

On the day we arrived at the Almeley church, an old building apparently dating form the 1200s. The rest of the family soon gathered along with cousins, siblings etc of my grandparents, and their own children. There were brief exchanges to some, mainly those men who had married my Dad's sisters as they did not like getting involved in the squabbling, and we also met some of the less immediate family who could harldy believe that my sister was the eldest of us, and that both of us were doctors of science and liguistics. It was obvious that many were looking to see how weird I looked, and of course who the woman was that I had married.

The herse arrived and we were instructed in how to carry the coffin, and soon we were carrying the coffin of my grandfather up to the church and inside. Once inside  we rest the coffin down and took our places with our respective families and the service began. There were hymns, prayer, and readings of a poem by the eldest aunt (but she was in too bad a way to do so so her husband spoke on her behalf), and a eulogy by the eldest of the uncles, who also could not finish due to tears, and so my Dad finished the reading (which many of my cousins thought was brave all things considered). I was even surprised to hear Sam's name read out in the service as the priest said a blessing for the entire family. Even Rob's name was read out.

Finally after the service we carried the coffin down into the graveyard and the six of us lowered the coffin, with the poppy wreath, into the ground to the sound of the Last Stand being played as my grandfather had been part of the army just after WWII, on manuvers in Africa.

Once the coffin had been lowered we six took off our poppies and dropped them into the grave and joined our respective families. Sam was stood holding a yellow flower, as were many of the other women of the family, and we all walked by and dropped the flowers, and a handful of dirt onto the coffin. Sam was glad that she had the chance to do this as was a better gesture considering our pagan view on things.

What struck me most when we had to carry the coffin out of the church was how my cousins who were carrying the coffin were crying. I thought perhaps it was because they lived in the area and so I was obviously more distant. But then after we had lowered the coffin, I noted how my own father was not crying. It seems being stoic is in my blood. But also we share the same view; that my grandfather had lived a good and long life, it is sad he has passed, but not tragic. It seems selfish to ask a man, who had worked as a farm labourer and soldier almost all his life, to carry on living living when his time has come to pass.

After the coffin had been lowered we stood in the graveyard, catching up with other family, and also meeting the priest, who my Dad proudly present myself and my sister to. We then went to Almeley hall for the reception where there was food and drinks. During our time there only a few of my immediate family spoke to myself or Sam. No surprise really as my mother joked that she must be the 'wicked witch' who put a spell on my Dad so she could get the family house. Seems Sam has had the same treatment. We did talk to some of my cousins, some who tought our wedding was a secret one (what ever excuses you need to reason why you were not invited, go ahead!), and we met my cousins wife who was expecting a boy very soon, and their daughter who was a cute little think and took a liking to my hair and Sam's red hair.

I don't know when we will be back that way again but I doubt it will too long as I expect another funeral to come. However it seems we may get invited to one of my cousins weddings (another had hers, didn't invite my Dad etc, but then her marriage has already fallen apart), as she seemed to think what myself and Sam did to be a really good idea.

Monday 18 January 2010

Final image for journal cover

The final version of the image for the journal that I have submitted




'A schematic of the CO/Ni(111) system and a feed-forward neural network'

Sunday 17 January 2010

Back from the Shire

Have to write about the week that has gone by. It's been a mixed bag. The funeral was ok in the end, and though I felt a little out of place it seems that it's not me that seemed to be stoic. Seems I get it from my Dad. I will write up my thoughts on it all tomorrow when I have more time. It was Sam's first chance to meet many of my immediate relations, some of whom were friendly, and others it seemed did not want to know as 'they didn't get to come to our wedding, wah wah wah!'. I mean one of my cousins thought the wedding was a secret (no just that it was small). It's funny my Mum refers to herself as the 'witch that put a spell on their brother'. Seems Sam is seen in the same way. Anyway I'll write more tomorrow. Tonight is Being Human, some ironing, writing, and getting Sam ready for her first day at her new job.

Oh and tomorrow I am 27! Weird.

Thursday 14 January 2010

Journal news

So the good news is that the image I submitted to go with my paper, and to be in the table of contents of the journal, well it is now going to be the image on the front cover of the journal!!! EPIC!!!!

Also my ugly mug will appear in the journal. I may have to by a hard copy for myself.

Monday 11 January 2010

Update

So SInce last I posted
  • Bad news, my grandfather died. The funeral is this weekend. I was never that close to him. I just now worry what the aunts and uncles will be like towards their brother, my dad, now he has past. My dad now has the family home (his by inheritance from his grandfather but kept by my grandmother as she was the trustee). No one like this situation, even though my dad could not have altered it. I wonder what will happen now to my grandmother. Does she even know her husband is dead? She is currently in a home and is not all there.
  • Roleplay has been going well, if a little slow due to Xmas. But all in all the game is shaping up to be better than when I first ran it 3 years back.
  • Headed up to Manchester just before Xmas. Was great to see Stacey and Alan and Daniel (Sam's brother) and of course to see Sam's mum. Xmas presents were exchanged and much merriment was had. Got a t-shirt with Soundwave on it from Sam, and also from her a new wallet (damn I needed one for so long), fleur de lys cufflinks. From Barbara I got Season 1 of 'How I met your Mother', and the Bro Code (a book written by one of the program's characters). Add to that some money and I was able to get new plastik wrap trousers!
  • Had epic pizza at Olive Press in Manchester.
  • NYE was spent back in Herefordshire, down in Logaston where at the new house. It was fucking freezing in the place. I had the cold of death hit me the night before we left Leam, so spent most of Xmas dowing cold medicine, blowing my nose (leading to unpleasant/worrying bleeding and coughing up blood!), and basically eating food while looking at Book of the Dead for nWoD. I also got off mum some nice new Issey Miyake aftershave, a book on Non-Christian Xmas. Sam got a apron and book on baking off my mum (which we have put to good use already) and from Zoe some makeup. Xmas with my family is never epic but it's just nice. We ate turkey and pheasant on NYE but the pheasant was not gamey enough, as my dad pointed out that they had been hung up for a few days but the cold had stop them from maturing.
  • Since NYE we have watched it snow lots,baked cookies, written rpg stuff, and now Sam has won her self a nice new job at the Uni!
  • Oh and I bleached my hair last night. Almost all the red has come out. It looks somewhat flame like.
Pics





Needs another bleaching

One of the cat's at Sam's mum's place. This is Amber being fat and soppy.

Snow outside Barbara's house in Manchester.

Tuesday 5 January 2010

Wow how time flies!

It's almost my 27th birthday (January 18th) and well I have high hopes for this decade.

Today I just finished writing my biography that will appear with my literature review. I just need to figure out which picture of myself to submit with it and sort out an image that captures the concepts of the paper. Fun!

Also in less than 2 months I will have been married for a year! Wow. Time has flown by on that first year. I miss Venice, and I really want to see Venice in the snow! Also in April I will have known Sam for 3 years. In some respects that doesn't feel that long, or long enough, and others it feels like I have known her all my life.

I hope that in the next year I can get the funding secured to continue my post, or at least find a new one, and of course get more papers out and go on some good holidays (Versailles, Venice, perhaps somewhere eastern europe), and perhaps get something published roleplay wise.

Saturday 2 January 2010

It was the year Twenty Ten

And if any fucker wants to call it the 'teens' or 'teenies' I'll kill them!

I've yet to write up about 2009, but hey, if interested ask some questions about the past year I have had and what I hope to do for the next year.